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CXCL13 C-X-C motif chemokine ligand 13 [ Lagenorhynchus obliquidens (Pacific white-sided dolphin) ]

Gene ID: 113609900, updated on 15-Mar-2024

Summary

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Gene symbol
CXCL13
Gene description
C-X-C motif chemokine ligand 13
See related
EnsemblRapid:ENSLOBG00000018072
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagenorhynchus obliquidens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Lagenorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM367639v1 (GCF_003676395.1) Unplaced Scaffold NW_020838003.1 (5670613..5675886)

NW_020838003.1Genomic Context describing neighboring genes Neighboring gene cyclin G2 Neighboring gene uncharacterized LOC113609877 Neighboring gene graves disease carrier protein pseudogene Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene CCR4-NOT transcription complex subunit 6 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020838003 Unplaced Scaffold Reference ASM367639v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CXCR chemokine receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chemokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to lipopolysaccharide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neutrophil chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-X-C motif chemokine 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagenorhynchus obliquidens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM367639v1 Primary Assembly

Genomic

  1. NW_020838003.1 Reference ASM367639v1 Primary Assembly

    Range
    5670613..5675886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027087608.1 → XP_026943409.1  C-X-C motif chemokine 13

    Related
    ENSLOBP00000024425.1, ENSLOBT00000026761.1
    Conserved Domains (1) summary
    cd00273
    Location:30 → 93
    Chemokine_CXC; 1 of 4 subgroup designations based on the arrangement of the two N-terminal cysteine residues; includes a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; many members contain an RCxC motif ...
Nucleotide Protein
Heading Accession and Version

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