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MSX1 msh homeobox 1 [ Acinonyx jubatus (cheetah) ]

Gene ID: 113592681, updated on 15-Mar-2024

Summary

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Gene symbol
MSX1
Gene description
msh homeobox 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: B1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) B1 NC_069382.1 (195635843..195640077)

Chromosome B1 - NC_069382.1Genomic Context describing neighboring genes Neighboring gene RNA-binding protein FXR1-like Neighboring gene M-phase phosphoprotein 6-like Neighboring gene uncharacterized LOC128314259 Neighboring gene uncharacterized LOC128314593

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069382.1 Chromosome B1 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein MSX-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069382.1 Reference VMU_Ajub_asm_v1.0

    Range
    195635843..195640077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027034396.2 → XP_026890197.1  homeobox protein MSX-1

    UniProtKB/TrEMBL
    A0A6J1XCH6
    Conserved Domains (1) summary
    pfam00046
    Location:175 → 229
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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