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itga9 integrin, alpha 9 [ Electrophorus electricus (electric eel) ]

Gene ID: 113588326, updated on 18-Jun-2024

Summary

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Gene symbol
itga9
Gene description
integrin, alpha 9
See related
Ensembl:ENSEEEG00000021804
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 11
Exon count:
28
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 11 NC_049545.1 (15944707..15993335, complement)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020825959.1 (2453076..2501528, complement)

Chromosome 11 - NC_049545.1Genomic Context describing neighboring genes Neighboring gene fibulin-7 Neighboring gene zinc finger CCCH domain-containing protein 6 Neighboring gene uncharacterized LOC118242222 Neighboring gene uncharacterized LOC113587718 Neighboring gene golgin A4 Neighboring gene potassium channel, subfamily K, member 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-9
Names
integrin subunit alpha 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049545.1 Reference fEleEle1.pri

    Range
    15944707..15993335 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035531687.1 → XP_035387580.1  integrin alpha-9

    UniProtKB/TrEMBL
    A0A4W4H456
    Related
    ENSEEEP00000046293.2, ENSEEET00000046802.2
    Conserved Domains (2) summary
    smart00191
    Location:360 → 413
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam08441
    Location:458 → 902
    Integrin_alpha2; Integrin alpha
Nucleotide Protein
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