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srd5a1 steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113543906, updated on 6-Jun-2024

Summary

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Gene symbol
srd5a1
Gene description
steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)
Locus tag
PHYPO_G00171140
See related
EnsemblRapid:ENSPHYG00025006461
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 29
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 29 NC_069738.1 (7007978..7015701, complement)

Chromosome 29 - NC_069738.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 90 Neighboring gene adenylate cyclase 2b (brain) Neighboring gene terminal nucleotidyltransferase 4A Neighboring gene NOP2/Sun RNA methyltransferase 2 Neighboring gene ubiquitin conjugating enzyme E2 QL1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069738.1 Chromosome 29 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxo-5-alpha-steroid 4-dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in steroid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-oxo-5-alpha-steroid 4-dehydrogenase 1
Names
steroid 5 alpha-reductase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069738.1 Reference fPanHyp1.pri

    Range
    7007978..7015701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026942444.3 → XP_026798245.3  3-oxo-5-alpha-steroid 4-dehydrogenase 1

    UniProtKB/TrEMBL
    A0A5N5JJX3
    Related
    ENSPHYP00025013998.1, ENSPHYT00025015300.1
Nucleotide Protein
Heading Accession and Version

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