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slitrk6 SLIT and NTRK-like family, member 6 [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113535808, updated on 6-Jun-2024

Summary

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Gene symbol
slitrk6
Gene description
SLIT and NTRK-like family, member 6
Locus tag
PHYPO_G00150680
See related
EnsemblRapid:ENSPHYG00025006438
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Orthologs
human zebrafish all
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Genomic context

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See slitrk6 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 26 NC_069735.1 (3795659..3809329)

Chromosome 26 - NC_069735.1Genomic Context describing neighboring genes Neighboring gene piggyBac transposable element-derived protein 3-like Neighboring gene SLIT and NTRK-like protein 5 Neighboring gene SLIT and NTRK-like protein 1 Neighboring gene uncharacterized LOC113535755

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069735.1 Chromosome 26 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of presynapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SLIT and NTRK-like protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069735.1 Reference fPanHyp1.pri

    Range
    3795659..3809329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026929328.3 → XP_026785129.3  SLIT and NTRK-like protein 6

    UniProtKB/TrEMBL
    A0A5N5JVZ4
    Related
    ENSPHYP00025013957.1, ENSPHYT00025015259.1
Nucleotide Protein
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