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ldhba lactate dehydrogenase Ba [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113531849, updated on 6-Jun-2024

Summary

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Gene symbol
ldhba
Gene description
lactate dehydrogenase Ba
Locus tag
PHYPO_G00085490
See related
EnsemblRapid:ENSPHYG00025020436
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Also known as
ldhb
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 18
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 18 NC_069727.1 (2894074..2913176, complement)

Chromosome 18 - NC_069727.1Genomic Context describing neighboring genes Neighboring gene golgi transport 1Ba Neighboring gene spexin hormone Neighboring gene glycogen synthase 2 Neighboring gene kisspeptin 2 Neighboring gene solute carrier family 25 member 3a Neighboring gene thymopoietin a Neighboring gene serine/threonine kinase receptor associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069727.1 Chromosome 18 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-lactate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-lactate dehydrogenase B-A chain
Names
lactate dehydrogenase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069727.1 Reference fPanHyp1.pri

    Range
    2894074..2913176 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053241884.1 → XP_053097859.1  L-lactate dehydrogenase B-A chain

    UniProtKB/TrEMBL
    A0A5N5LGJ7
    Related
    ENSPHYP00025048882.1, ENSPHYT00025052499.1

  2. XM_026922781.3 → XP_026778582.1  L-lactate dehydrogenase B-A chain

    UniProtKB/TrEMBL
    A0A5N5LGJ7
    Related
    ENSPHYP00025048889.1, ENSPHYT00025052513.1
    Conserved Domains (1) summary
    cd05293
    Location:34 → 330
    LDH_1; A subgroup of L-lactate dehydrogenases
Nucleotide Protein
Heading Accession and Version

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