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BLNK B cell linker [ Athene cunicularia (burrowing owl) ]

Gene ID: 113481769, updated on 11-Apr-2024

Summary

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Gene symbol
BLNK
Gene description
B cell linker
Gene type
protein coding
RefSeq status
MODEL
Organism
Athene cunicularia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Strigiformes; Strigidae; Athene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
25
Annotation release Status Assembly Chr Location
100 current athCun1 (GCF_003259725.1) 6 Unlocalized Scaffold NW_020799105.1 (9466297..9568183, complement)

NW_020799105.1Genomic Context describing neighboring genes Neighboring gene cyclin J Neighboring gene zinc finger protein 518A Neighboring gene DNA nucleotidylexotransferase Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020799105 Chromosome 6 Unlocalized Scaffold Reference athCun1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B-cell linker protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference athCun1

Genomic

  1. NW_020799105.1 Reference athCun1

    Range
    9466297..9568183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026851652.1 → XP_026707453.1  B-cell linker protein isoform X1

    UniProtKB/TrEMBL
    A0A663MAR5
    Conserved Domains (2) summary
    cd09929
    Location:397 → 517
    SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)
    cl26464
    Location:55 → 387
    Atrophin-1; Atrophin-1 family

  2. XM_026851653.1 → XP_026707454.1  B-cell linker protein isoform X2

    Conserved Domains (3) summary
    cd09929
    Location:480 → 600
    SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)
    cl15755
    Location:10 → 75
    SAM_superfamily; SAM (Sterile alpha motif )
    cl26464
    Location:140 → 470
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
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