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JAG1 jagged canonical Notch ligand 1 [ Pseudonaja textilis ]

Gene ID: 113442658, updated on 15-Mar-2024

Summary

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Gene symbol
JAG1
Gene description
jagged canonical Notch ligand 1
See related
Ensembl:ENSPTXG00000012271
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769355.1 (1484035..1517152)

NW_020769355.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113442696 Neighboring gene protein jagged-1-like Neighboring gene SLX4 interacting protein Neighboring gene MKKS centrosomal shuttling protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769355 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of epithelial cell apical/basal polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein-containing complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein jagged-1
Names
jagged 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769355.1 Reference EBS10Xv2-PRI

    Range
    1484035..1517152
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026710366.1 → XP_026566151.1  protein jagged-1

    UniProtKB/TrEMBL
    A0A670Z7N3
    Related
    ENSPTXP00000017853.1, ENSPTXT00000018390.1
    Conserved Domains (3) summary
    smart00215
    Location:637 → 705
    VWC_out; von Willebrand factor (vWF) type C domain
    cd00054
    Location:403 → 439
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00008
    Location:522 → 552
    EGF; EGF-like domain
Nucleotide Protein
Heading Accession and Version

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