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GARNL3 GTPase activating Rap/RanGAP domain like 3 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113426844, updated on 15-Mar-2024

Summary

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Gene symbol
GARNL3
Gene description
GTPase activating Rap/RanGAP domain like 3
See related
Ensembl:ENSNSUG00000012914
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020717147.1 (60263..102505, complement)

NW_020717147.1Genomic Context describing neighboring genes Neighboring gene F-box and WD repeat domain containing 2 Neighboring gene solute carrier family 2 member 8 Neighboring gene erythrocyte band 7 integral membrane protein Neighboring gene erythrocyte band 7 integral membrane protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020717147 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of small GTPase mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GTPase-activating Rap/Ran-GAP domain-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020717147.1 Reference TS10Xv2-PRI

    Range
    60263..102505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026689253.1 → XP_026545038.1  GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A6J1VWP5
    Conserved Domains (2) summary
    pfam00780
    Location:501 → 804
    CNH; CNH domain
    pfam02145
    Location:229 → 407
    Rap_GAP; Rap/ran-GAP

  2. XM_026689254.1 → XP_026545039.1  GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A6J1VYG7
    Related
    ENSNSUP00000017606.1, ENSNSUT00000018732.1
    Conserved Domains (2) summary
    pfam00780
    Location:487 → 790
    CNH; CNH domain
    pfam02145
    Location:215 → 393
    Rap_GAP; Rap/ran-GAP

  3. XM_026689255.1 → XP_026545040.1  GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J1VPV0
    Conserved Domains (2) summary
    pfam00780
    Location:380 → 683
    CNH; CNH domain
    pfam02145
    Location:108 → 286
    Rap_GAP; Rap/ran-GAP
Nucleotide Protein
Heading Accession and Version

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