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PALS1 protein associated with LIN7 1, MAGUK p55 family member [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113414325, updated on 15-Mar-2024

Summary

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Gene symbol
PALS1
Gene description
protein associated with LIN7 1, MAGUK p55 family member
See related
Ensembl:ENSNSUG00000017690
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Also known as
MPP5
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716647.1 (4584856..4638636, complement)

NW_020716647.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2 subunit alpha Neighboring gene ATPase H+ transporting V1 subunit D Neighboring gene endothelial differentiation-related factor 1 homolog pseudogene Neighboring gene golgi associated RAB2 interactor family member 2 Neighboring gene gephyrin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716647 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in establishment or maintenance of epithelial cell apical/basal polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of polarity of embryonic epithelium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in generation of neurons IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in morphogenesis of an epithelial sheet IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAGUK p55 subfamily member 5
Names
membrane palmitoylated protein 5
protein associated with LIN7 1, MAGUK family member

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716647.1 Reference TS10Xv2-PRI

    Range
    4584856..4638636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026671161.1 → XP_026526946.1  MAGUK p55 subfamily member 5

    UniProtKB/TrEMBL
    A0A6J1U7S1
    Related
    ENSNSUP00000024501.1, ENSNSUT00000026037.1
Nucleotide Protein
Heading Accession and Version

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