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TTC39B tetratricopeptide repeat domain 39B [ Ursus arctos (brown bear) ]

Gene ID: 113260608, updated on 15-Mar-2024

Summary

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Gene symbol
TTC39B
Gene description
tetratricopeptide repeat domain 39B
See related
EnsemblRapid:ENSUARG00005012213
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622852.1 (9729223..9878054, complement)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929683.1 (8874758..8999836, complement)

NW_026622852.1Genomic Context describing neighboring genes Neighboring gene cerberus 1, DAN family BMP antagonist Neighboring gene FRAS1 related extracellular matrix 1 Neighboring gene 60S ribosomal protein L30-like Neighboring gene small nuclear RNA activating complex polypeptide 3 Neighboring gene PC4 and SRSF1 interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cholesterol storage IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cholesterol efflux IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 39B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622852.1 Reference UrsArc2.0 Primary Assembly

    Range
    9729223..9878054 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057313444.1 → XP_057169427.1  tetratricopeptide repeat protein 39B

RNA

  1. XR_008959866.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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