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Slc44a4 solute carrier family 44 member 4 [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113201570, updated on 15-Mar-2024

Summary

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Gene symbol
Slc44a4
Gene description
solute carrier family 44 member 4
See related
Ensembl:ENSUPAG00010020118
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020540566.1 (353529..373129)

NW_020540566.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113201595 Neighboring gene zinc finger and BTB domain containing 12 Neighboring gene euchromatic histone lysine methyltransferase 2 Neighboring gene neuraminidase 1 Neighboring gene heat shock 70 kDa protein 1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020540566 Unplaced Scaffold Reference ASM342692v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in choline transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in thiamine pyrophosphate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline transporter-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020540566.1 Reference ASM342692v1

    Range
    353529..373129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026415344.1 → XP_026271129.1  choline transporter-like protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8D2KN89
    Related
    ENSUPAP00010025553.1, ENSUPAT00010029072.1
    Conserved Domains (1) summary
    pfam04515
    Location:313 → 673
    Choline_transpo; Plasma-membrane choline transporter

  2. XM_026415345.1 → XP_026271130.1  choline transporter-like protein 4 isoform X2

    Conserved Domains (1) summary
    pfam04515
    Location:313 → 671
    Choline_transpo; Plasma-membrane choline transporter

  3. XM_026415346.1 → XP_026271131.1  choline transporter-like protein 4 isoform X3

    Conserved Domains (1) summary
    pfam04515
    Location:271 → 631
    Choline_transpo; Plasma-membrane choline transporter
Nucleotide Protein
Heading Accession and Version

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