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Tmc6 transmembrane channel like 6 [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113196497, updated on 15-Mar-2024

Summary

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Gene symbol
Tmc6
Gene description
transmembrane channel like 6
See related
Ensembl:ENSUPAG00010003577
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020540270.1 (178266..192646, complement)

NW_020540270.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113196478 Neighboring gene trinucleotide repeat containing adaptor 6C Neighboring gene transmembrane channel like 8 Neighboring gene synaptogyrin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020540270 Unplaced Scaffold Reference ASM342692v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mechanosensitive monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane channel-like protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020540270.1 Reference ASM342692v1

    Range
    178266..192646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026408450.1 → XP_026264235.1  transmembrane channel-like protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A8D2GUJ0
    Related
    ENSUPAP00010004392.1, ENSUPAT00010005043.1
    Conserved Domains (1) summary
    pfam07810
    Location:545 → 651
    TMC; TMC domain

  2. XM_026408451.1 → XP_026264236.1  transmembrane channel-like protein 6 isoform X2

    Conserved Domains (1) summary
    pfam07810
    Location:545 → 651
    TMC; TMC domain
Nucleotide Protein
Heading Accession and Version

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