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Pltp phospholipid transfer protein [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113196448, updated on 15-Mar-2024

Summary

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Gene symbol
Pltp
Gene description
phospholipid transfer protein
See related
Ensembl:ENSUPAG00010002438
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020540269.1 (342850..353451)

NW_020540269.1Genomic Context describing neighboring genes Neighboring gene matrix metallopeptidase 9 Neighboring gene zinc finger protein 335 Neighboring gene phosphorylated CTD interacting factor 1 Neighboring gene cathepsin A Neighboring gene neuralized E3 ubiquitin protein ligase 2 Neighboring gene spermatogenesis associated 25

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020540269 Unplaced Scaffold Reference ASM342692v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ceramide transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables diacylglycerol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidic acid transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylethanolamine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylethanolamine transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylglycerol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in high-density lipoprotein particle remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid transfer protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020540269.1 Reference ASM342692v1

    Range
    342850..353451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026408376.1 → XP_026264161.1  phospholipid transfer protein

    UniProtKB/TrEMBL
    A0A8D2GR54
    Related
    ENSUPAP00010003045.1, ENSUPAT00010003510.1
    Conserved Domains (2) summary
    cd00025
    Location:21 → 239
    BPI1; BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...
    pfam02886
    Location:228 → 464
    LBP_BPI_CETP_C; LBP / BPI / CETP family, C-terminal domain
Nucleotide Protein
Heading Accession and Version

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