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ptpmt1 protein tyrosine phosphatase mitochondrial 1 [ Anabas testudineus (climbing perch) ]

Gene ID: 113174045, updated on 15-Mar-2024

Summary

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Gene symbol
ptpmt1
Gene description
protein tyrosine phosphatase mitochondrial 1
See related
Ensembl:ENSATEG00000017238
Gene type
protein coding
RefSeq status
MODEL
Organism
Anabas testudineus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Anabantidae; Anabas
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
101 current fAnaTes1.2 (GCF_900324465.2) 3 NC_046612.1 (2227678..2230155, complement)
100 previous assembly fAnaTes1.1 (GCF_900324465.1) Unplaced Scaffold NW_020536009.1 (2227697..2230155, complement)

Chromosome 3 - NC_046612.1Genomic Context describing neighboring genes Neighboring gene C1q and TNF related 4 Neighboring gene NADH:ubiquinone oxidoreductase core subunit S3 Neighboring gene protein regulator of cytokinesis 1b Neighboring gene VPS33B late endosome and lysosome associated

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylglycerophosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anabas testudineus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAnaTes1.2 Primary Assembly

Genomic

  1. NC_046612.1 Reference fAnaTes1.2 Primary Assembly

    Range
    2227678..2230155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026377703.2 → XP_026233488.1  phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1

    UniProtKB/TrEMBL
    A0A3Q1J3P6
    Related
    ENSATEP00000024823.1, ENSATET00000025222.2
Nucleotide Protein
Heading Accession and Version

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