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nup107 nucleoporin 107 [ Anabas testudineus (climbing perch) ]

Gene ID: 113164243, updated on 15-Mar-2024

Summary

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Gene symbol
nup107
Gene description
nucleoporin 107
See related
Ensembl:ENSATEG00000021708
Gene type
protein coding
RefSeq status
MODEL
Organism
Anabas testudineus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Anabantidae; Anabas
Orthologs
human zebrafish all
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Genomic context

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See nup107 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
27
Annotation release Status Assembly Chr Location
101 current fAnaTes1.2 (GCF_900324465.2) 23 NC_046631.1 (11371002..11379368)
100 previous assembly fAnaTes1.1 (GCF_900324465.1) Unplaced Scaffold NW_020535996.1 (46492985..46501351)

Chromosome 23 - NC_046631.1Genomic Context describing neighboring genes Neighboring gene UPF2 regulator of nonsense mediated mRNA decay Neighboring gene solute carrier family 35 member E3 Neighboring gene MDM2 proto-oncogene Neighboring gene plexin b2a, tandem duplicate 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore outer ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup107

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anabas testudineus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAnaTes1.2 Primary Assembly

Genomic

  1. NC_046631.1 Reference fAnaTes1.2 Primary Assembly

    Range
    11371002..11379368
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026363435.1 → XP_026219220.1  nuclear pore complex protein Nup107

    UniProtKB/TrEMBL
    A0A3Q1J990, A0A7N6B0U3
    Related
    ENSATEP00000031522.2, ENSATET00000031988.2
Nucleotide Protein
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