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LOC113157550 collagen alpha-1(XXV) chain [ Anabas testudineus (climbing perch) ]

Gene ID: 113157550, updated on 15-Mar-2024

Summary

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Gene symbol
LOC113157550
Gene description
collagen alpha-1(XXV) chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Anabas testudineus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Anabantidae; Anabas
Also known as
col25a1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 18
Exon count:
38
Annotation release Status Assembly Chr Location
101 current fAnaTes1.2 (GCF_900324465.2) 18 NC_046627.1 (14695042..14831366)
100 previous assembly fAnaTes1.1 (GCF_900324465.1) Unplaced Scaffold NW_020535989.1 (1191320..1327644)

Chromosome 18 - NC_046627.1Genomic Context describing neighboring genes Neighboring gene La ribonucleoprotein 7, transcriptional regulator Neighboring gene stabilizer of axonemal microtubules 2 Neighboring gene ethanolamine-phosphate phospho-lyase Neighboring gene oligosaccharyltransferase complex subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collagen alpha-1(XXV) chain
Names
collagen type XXV alpha 1 chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anabas testudineus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAnaTes1.2 Primary Assembly

Genomic

  1. NC_046627.1 Reference fAnaTes1.2 Primary Assembly

    Range
    14695042..14831366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026353111.1 → XP_026208896.1  collagen alpha-1(XXV) chain isoform X2

  2. XM_026353110.1 → XP_026208895.1  collagen alpha-1(XXV) chain isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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