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col10a1b collagen, type X, alpha 1b [ Anabas testudineus (climbing perch) ]

Gene ID: 113149344, updated on 15-Mar-2024

Summary

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Gene symbol
col10a1b
Gene description
collagen, type X, alpha 1b
See related
Ensembl:ENSATEG00000012158
Gene type
protein coding
RefSeq status
MODEL
Organism
Anabas testudineus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Anabantidae; Anabas
Also known as
col10a1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 24
Exon count:
3
Annotation release Status Assembly Chr Location
101 current fAnaTes1.2 (GCF_900324465.2) 24 NC_046632.1 (1097017..1102547)
100 previous assembly fAnaTes1.1 (GCF_900324465.1) Unplaced Scaffold NW_020536016.1 (1097017..1102547)

Chromosome 24 - NC_046632.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 4 Neighboring gene dermatan sulfate epimerase Neighboring gene 5'-nucleotidase domain containing 1 Neighboring gene tyrosine-protein kinase SRK2-like Neighboring gene tyrosine-protein kinase SRK2-like Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-1(X) chain
Names
collagen type X alpha 1 chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anabas testudineus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAnaTes1.2 Primary Assembly

Genomic

  1. NC_046632.1 Reference fAnaTes1.2 Primary Assembly

    Range
    1097017..1102547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026341416.1 → XP_026197201.1  collagen alpha-1(X) chain

    UniProtKB/TrEMBL
    A0A3Q1I7I0
    Related
    ENSATEP00000017457.1, ENSATET00000017750.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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