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greb1l GREB1 like retinoic acid receptor coactivator [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113134034, updated on 15-Mar-2024

Summary

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Gene symbol
greb1l
Gene description
GREB1 like retinoic acid receptor coactivator
See related
Ensembl:ENSMAMG00000016886
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 17
Exon count:
35
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 17 NC_046649.1 (16466918..16504610)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535907.1 (16466918..16504610)

Chromosome 17 - NC_046649.1Genomic Context describing neighboring genes Neighboring gene THO complex 1 Neighboring gene ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) Neighboring gene Rho-associated, coiled-coil containing protein kinase 1 Neighboring gene abhydrolase domain containing 3, phospholipase Neighboring gene uncharacterized LOC113133836 Neighboring gene MIB E3 ubiquitin protein ligase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in kidney development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GREB1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046649.1 Reference fMasArm1.2 Primary Assembly

    Range
    16466918..16504610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026313225.1 → XP_026169010.1  GREB1-like protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q3SII0
    Conserved Domains (1) summary
    pfam15782
    Location:1 → 1947
    GREB1; Gene regulated by oestrogen in breast cancer

  2. XM_026313228.1 → XP_026169013.1  GREB1-like protein isoform X3

    UniProtKB/TrEMBL
    A0A3Q3SII0
    Conserved Domains (1) summary
    pfam15782
    Location:1 → 1946
    GREB1; Gene regulated by oestrogen in breast cancer

  3. XM_026313227.1 → XP_026169012.1  GREB1-like protein isoform X2

    UniProtKB/TrEMBL
    A0A3Q3SII0
    Related
    ENSMAMP00000025185.2, ENSMAMT00000025835.2
    Conserved Domains (1) summary
    pfam15782
    Location:1 → 1946
    GREB1; Gene regulated by oestrogen in breast cancer

  4. XM_026313229.1 → XP_026169014.1  GREB1-like protein isoform X4

    UniProtKB/TrEMBL
    A0A3Q3SII0
    Related
    ENSMAMP00000054936.1, ENSMAMT00000043996.1
    Conserved Domains (1) summary
    pfam15782
    Location:1 → 1945
    GREB1; Gene regulated by oestrogen in breast cancer

  5. XM_026313226.1 → XP_026169011.1  GREB1-like protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q3SII0
    Conserved Domains (1) summary
    pfam15782
    Location:1 → 1947
    GREB1; Gene regulated by oestrogen in breast cancer
Nucleotide Protein
Heading Accession and Version

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