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LOC113129437 AP-1 complex subunit sigma-2 [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113129437, updated on 14-Dec-2023

Summary

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Gene symbol
LOC113129437
Gene description
AP-1 complex subunit sigma-2
See related
Ensembl:ENSMAMG00000013016
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
Also known as
ap1s2
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 4 NC_046636.1 (19999918..20016344, complement)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535868.1 (5932963..5949389, complement)

Chromosome 4 - NC_046636.1Genomic Context describing neighboring genes Neighboring gene shroom family member 2a Neighboring gene synapse associated protein 1 Neighboring gene cyclin dependent kinase like 5 Neighboring gene retinoschisin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-1 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-1 complex subunit sigma-2
Names
adaptor related protein complex 1 subunit sigma 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046636.1 Reference fMasArm1.2 Primary Assembly

    Range
    19999918..20016344 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026305430.1 → XP_026161215.1  AP-1 complex subunit sigma-2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3M9E5
    Conserved Domains (1) summary
    cd14831
    Location:2 → 144
    AP1_sigma; AP-1 complex subunit sigma

  2. XM_026305431.1 → XP_026161216.1  AP-1 complex subunit sigma-2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q3M9E5
    Related
    ENSMAMP00000064336.1, ENSMAMT00000065078.1
    Conserved Domains (1) summary
    cd14831
    Location:2 → 142
    AP1_sigma; AP-1 complex subunit sigma
Nucleotide Protein
Heading Accession and Version

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