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bco2 beta-carotene oxygenase 2 [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113122679, updated on 14-Dec-2023

Summary

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Gene symbol
bco2
Gene description
beta-carotene oxygenase 2
See related
Ensembl:ENSMAMG00000000539
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
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Genomic context

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See bco2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 13 NC_046645.1 (14873424..14877833)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535858.1 (34549383..34553792)

Chromosome 13 - NC_046645.1Genomic Context describing neighboring genes Neighboring gene translocase of inner mitochondrial membrane 8 homolog B (yeast) Neighboring gene succinate dehydrogenase complex, subunit D, integral membrane protein b Neighboring gene sortilin-related receptor, L(DLR class) A repeats containing Neighboring gene ATP-binding cassette sub-family G member 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta,beta-carotene 9',10'-oxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046645.1 Reference fMasArm1.2 Primary Assembly

    Range
    14873424..14877833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026294178.1 → XP_026149963.1  beta,beta-carotene 9',10'-oxygenase

    UniProtKB/TrEMBL
    A0A7N9B1A2
    Related
    ENSMAMP00000065335.1, ENSMAMT00000042919.1
    Conserved Domains (1) summary
    pfam03055
    Location:42 → 550
    RPE65; Retinal pigment epithelial membrane protein
Nucleotide Protein
Heading Accession and Version

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