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pde4d phosphodiesterase 4D [ Carassius auratus (goldfish) ]

Gene ID: 113107082, updated on 9-Nov-2023

Summary

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Gene symbol
pde4d
Gene description
phosphodiesterase 4D
See related
Ensembl:ENSCARG00000001072
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See pde4d in Genome Data Viewer
Location:
chromosome: 8
Exon count:
23
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) 8 NC_039250.1 (5729035..5836800)

Chromosome 8 - NC_039250.1Genomic Context describing neighboring genes Neighboring gene DNA excision repair protein ERCC-8-like Neighboring gene elongation of very long chain fatty acids protein 7-like Neighboring gene uncharacterized LOC113107084 Neighboring gene RAB3C, member RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039250.1 Chromosome 8 Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-AMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-specific 3',5'-cyclic phosphodiesterase 4D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039250.1 Reference ASM336829v1 Primary Assembly

    Range
    5729035..5836800
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026269264.1 → XP_026125049.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X3

    UniProtKB/TrEMBL
    A0A6P6PVR8
    Related
    ENSCARP00000004075.1, ENSCART00000004319.1
    Conserved Domains (1) summary
    pfam00233
    Location:373 → 610
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  2. XM_026269272.1 → XP_026125057.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X10

    UniProtKB/TrEMBL
    A0A6P6PWB0
    Conserved Domains (1) summary
    pfam00233
    Location:406 → 643
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  3. XM_026269262.1 → XP_026125047.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X1

    UniProtKB/TrEMBL
    A0A6P6PWA0
    Related
    ENSCARP00000004163.1, ENSCART00000004414.1
    Conserved Domains (1) summary
    pfam00233
    Location:404 → 641
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  4. XM_026269271.1 → XP_026125056.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X9

    UniProtKB/TrEMBL
    A0A6P6PU44
    Conserved Domains (1) summary
    pfam00233
    Location:399 → 636
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  5. XM_026269263.1 → XP_026125048.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X2

    UniProtKB/TrEMBL
    A0A6P6PVA3
    Related
    ENSCARP00000004171.1, ENSCART00000004423.1
    Conserved Domains (1) summary
    pfam00233
    Location:397 → 634
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  6. XM_026269265.1 → XP_026125050.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X4

    UniProtKB/TrEMBL
    A0A6P6PYC5
    Related
    ENSCARP00000004199.1, ENSCART00000004453.1
    Conserved Domains (1) summary
    pfam00233
    Location:358 → 595
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  7. XM_026269270.1 → XP_026125055.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X8

    UniProtKB/TrEMBL
    A0A6P6PYC9
    Conserved Domains (1) summary
    pfam00233
    Location:353 → 590
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  8. XM_026269266.1 → XP_026125051.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X5

    UniProtKB/TrEMBL
    A0A6P6PU40
    Related
    ENSCARP00000004212.1, ENSCART00000004466.1
    Conserved Domains (1) summary
    pfam00233
    Location:354 → 591
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  9. XM_026269268.1 → XP_026125053.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X6

    UniProtKB/TrEMBL
    A0A6P6PVA6
    Related
    ENSCARP00000004258.1, ENSCART00000004510.1
    Conserved Domains (1) summary
    pfam00233
    Location:334 → 571
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  10. XM_026269269.1 → XP_026125054.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X7

    UniProtKB/TrEMBL
    A0A6P6PVS3
    Conserved Domains (1) summary
    pfam00233
    Location:171 → 408
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein Strain
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