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garnl3 GTPase activating Rap/RanGAP domain like 3 [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113025518, updated on 15-Mar-2024

Summary

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Gene symbol
garnl3
Gene description
GTPase activating Rap/RanGAP domain like 3
See related
Ensembl:ENSACLG00000027760
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 7
Exon count:
32
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 7 NC_039308.1 (16329990..16416625)

Chromosome 7 - NC_039308.1Genomic Context describing neighboring genes Neighboring gene calcium channel flower domain containing 1 Neighboring gene carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like Neighboring gene uncharacterized LOC113025536 Neighboring gene prostaglandin E synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039308.1 Chromosome 7 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of small GTPase mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GTPase-activating Rap/Ran-GAP domain-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039308.1 Reference fAstCal1.2 Primary Assembly

    Range
    16329990..16416625
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026173355.1 → XP_026029140.1  GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A3P8RGP7
    Related
    ENSACLP00000041255.1, ENSACLT00000042225.1

  2. XM_026173358.1 → XP_026029143.1  GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A3P8RHG6
    Related
    ENSACLP00000041263.1, ENSACLT00000042233.1

  3. XM_026173356.1 → XP_026029141.1  GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X2

  4. XM_026173360.1 → XP_026029145.1  GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X5

  5. XM_026173357.1 → XP_026029142.1  GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A3P8RI36
    Related
    ENSACLP00000041269.1, ENSACLT00000042239.1
Nucleotide Protein
Heading Accession and Version

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