U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

fbxw7 F-box and WD repeat domain containing 7 [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113024373, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
fbxw7
Gene description
F-box and WD repeat domain containing 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 6 NC_039307.1 (26831070..26902609, complement)

Chromosome 6 - NC_039307.1Genomic Context describing neighboring genes Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene glutamyl-tRNA(Gln) amidotransferase, subunit B Neighboring gene dCTP pyrophosphatase 1 Neighboring gene transmembrane protein 154 Neighboring gene translation machinery associated 16 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_039307.1 Chromosome 6 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
F-box/WD repeat-containing protein 7

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039307.1 Reference fAstCal1.2 Primary Assembly

    Range
    26831070..26902609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026171388.1 → XP_026027173.1  F-box/WD repeat-containing protein 7 isoform X1

    Conserved Domains (3) summary
    cd00200
    Location:283 → 559
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:293 → 328
    7WD40; WD40 repeat [structural motif]
    pfam12937
    Location:190 → 234
    F-box-like; F-box-like

  2. XM_026171389.1 → XP_026027174.1  F-box/WD repeat-containing protein 7 isoform X2

    Conserved Domains (3) summary
    cd00200
    Location:220 → 496
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:230 → 265
    7WD40; WD40 repeat [structural motif]
    pfam12937
    Location:127 → 171
    F-box-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.