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st6galnac5a ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113010550, updated on 15-Mar-2024

Summary

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Gene symbol
st6galnac5a
Gene description
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a
See related
Ensembl:ENSACLG00000006358
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Also known as
st6galnac5
Orthologs
human zebrafish all
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Genomic context

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See st6galnac5a in Genome Data Viewer
Location:
chromosome: 18
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 18 NC_039319.1 (9458565..9528298)

Chromosome 18 - NC_039319.1Genomic Context describing neighboring genes Neighboring gene Rab geranylgeranyltransferase subunit beta Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 Neighboring gene uncharacterized LOC113010551 Neighboring gene uncharacterized LOC113010547 Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class K Neighboring gene adenylate kinase 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039319.1 Chromosome 18 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
Names
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039319.1 Reference fAstCal1.2 Primary Assembly

    Range
    9458565..9528298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026149654.1 → XP_026005439.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

    UniProtKB/TrEMBL
    A0A3P8NX22
    Related
    ENSACLP00000009302.1, ENSACLT00000009519.1
    Conserved Domains (1) summary
    pfam00777
    Location:75 → 264
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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