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PEPD peptidase D [ Dromaius novaehollandiae (emu) ]

Gene ID: 112987618, updated on 6-Jun-2024

Summary

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Gene symbol
PEPD
Gene description
peptidase D
See related
Ensembl:ENSDNVG00000011243
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) 13 NC_088110.1 (13612163..13811603, complement)
100 previous assembly droNov1 (GCF_003342905.1) Unplaced Scaffold NW_020453371.1 (428804..628316, complement)

Chromosome 13 - NC_088110.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112987623 Neighboring gene uncharacterized LOC135329782 Neighboring gene CCAAT enhancer binding protein gamma Neighboring gene carbohydrate sulfotransferase 8 Neighboring gene uncharacterized LOC135329784 Neighboring gene uncharacterized LOC135329783

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables manganese ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloaminopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xaa-Pro dipeptidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088110.1 Reference bDroNov1.hap1

    Range
    13612163..13811603 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026107578.2 → XP_025963363.2  xaa-Pro dipeptidase isoform X1

    UniProtKB/TrEMBL
    A0A8C4K2M5

  2. XM_026107580.2 → XP_025963365.2  xaa-Pro dipeptidase isoform X1

    UniProtKB/TrEMBL
    A0A8C4K2M5

  3. XM_026107579.2 → XP_025963364.2  xaa-Pro dipeptidase isoform X2

    UniProtKB/TrEMBL
    A0A8C4P966
Nucleotide Protein
Heading Accession and Version

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