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SPOCK3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112965908, updated on 15-Mar-2024

Summary

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Gene symbol
SPOCK3
Gene description
SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3
See related
Ensembl:ENSARWG00000006626
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See SPOCK3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020448608.1 (1285588..1408835, complement)

NW_020448608.1Genomic Context describing neighboring genes Neighboring gene carboxypeptidase E Neighboring gene tolloid like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020448608 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
testican-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020448608.1 Reference aptRow1

    Range
    1285588..1408835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026065408.1 → XP_025921193.1  testican-3

    Related
    ENSARWP00000009482.1, ENSARWT00000010814.1
    Conserved Domains (3) summary
    smart00280
    Location:49 → 92
    KAZAL; Kazal type serine protease inhibitors
    pfam00086
    Location:226 → 289
    Thyroglobulin_1; Thyroglobulin type-1 repeat
    cd16239
    Location:110 → 222
    EFh_SPARC_TICN3; EF-hand, extracellular calcium-binding (EC) motif, found in testican-3 (TICN3)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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