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SLC8A3 solute carrier family 8 member A3 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112963674, updated on 15-Mar-2024

Summary

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Gene symbol
SLC8A3
Gene description
solute carrier family 8 member A3
See related
Ensembl:ENSARWG00000001347
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020448008.1 (311866..425332)

NW_020448008.1Genomic Context describing neighboring genes Neighboring gene deubiquitinase DESI2-like Neighboring gene cytochrome c oxidase assembly protein COX16 homolog, mitochondrial Neighboring gene SPARC related modular calcium binding 1 Neighboring gene uncharacterized LOC112963669 Neighboring gene solute carrier family 10 member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020448008 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium:sodium antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/calcium exchanger 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020448008.1 Reference aptRow1

    Range
    311866..425332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026060967.1 → XP_025916752.1  sodium/calcium exchanger 3 isoform X9

    Related
    ENSARWP00000001698.1, ENSARWT00000002014.1
    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 919
    caca; sodium/calcium exchanger 1

  2. XM_026060959.1 → XP_025916744.1  sodium/calcium exchanger 3 isoform X1

    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 953
    caca; sodium/calcium exchanger 1

  3. XM_026060960.1 → XP_025916745.1  sodium/calcium exchanger 3 isoform X2

    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 931
    caca; sodium/calcium exchanger 1

  4. XM_026060964.1 → XP_025916749.1  sodium/calcium exchanger 3 isoform X6

    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 922
    caca; sodium/calcium exchanger 1

  5. XM_026060962.1 → XP_025916747.1  sodium/calcium exchanger 3 isoform X4

    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 926
    caca; sodium/calcium exchanger 1

  6. XM_026060963.1 → XP_025916748.1  sodium/calcium exchanger 3 isoform X5

    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 923
    caca; sodium/calcium exchanger 1

  7. XM_026060961.1 → XP_025916746.1  sodium/calcium exchanger 3 isoform X3

    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 930
    caca; sodium/calcium exchanger 1

  8. XM_026060965.1 → XP_025916750.1  sodium/calcium exchanger 3 isoform X7

    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 921
    caca; sodium/calcium exchanger 1

  9. XM_026060966.1 → XP_025916751.1  sodium/calcium exchanger 3 isoform X8

    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 920
    caca; sodium/calcium exchanger 1

  10. XM_026060968.1 → XP_025916753.1  sodium/calcium exchanger 3 isoform X10

    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 918
    caca; sodium/calcium exchanger 1

  11. XM_026060969.1 → XP_025916754.1  sodium/calcium exchanger 3 isoform X11

    Related
    ENSARWP00000001699.1, ENSARWT00000002015.1
    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 915
    caca; sodium/calcium exchanger 1
Nucleotide Protein
Heading Accession and Version

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