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GATAD2B GATA zinc finger domain containing 2B [ Nothoprocta perdicaria ]

Gene ID: 112954111, updated on 15-Mar-2024

Summary

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Gene symbol
GATAD2B
Gene description
GATA zinc finger domain containing 2B
See related
Ensembl:ENSNPEG00000000364
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020455738.1 (168259..177409, complement)

NW_020455738.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 3 Neighboring gene solute carrier family 27 member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020455738 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NuRD complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional repressor p66-beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020455738.1 Reference notPer1

    Range
    168259..177409 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026047254.1 → XP_025903039.1  transcriptional repressor p66-beta

    UniProtKB/TrEMBL
    A0A8C6YL00
    Related
    ENSNPEP00000000419.1, ENSNPET00000000428.1
    Conserved Domains (3) summary
    pfam00320
    Location:418 → 452
    GATA; GATA zinc finger
    pfam16563
    Location:156 → 192
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
    cl25836
    Location:184 → 338
    Retinal; Retinal protein
Nucleotide Protein
Heading Accession and Version

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