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ATM ATM serine/threonine kinase [ Nothoprocta perdicaria ]

Gene ID: 112943759, updated on 15-Mar-2024

Summary

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Gene symbol
ATM
Gene description
ATM serine/threonine kinase
See related
Ensembl:ENSNPEG00000006881
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
63
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020454705.1 (1576998..1632119, complement)

NW_020454705.1Genomic Context describing neighboring genes Neighboring gene transfer RNA valine (anticodon AAC) Neighboring gene protein O-glucosyltransferase 3 Neighboring gene chromosome unknown C11orf65 homolog Neighboring gene protein NPAT Neighboring gene acetyl-CoA acetyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020454705 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine-protein kinase ATM

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020454705.1 Reference notPer1

    Range
    1576998..1632119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026035009.1 → XP_025890794.1  serine-protein kinase ATM isoform X2

    UniProtKB/TrEMBL
    A0A8C6Z7X0
    Related
    ENSNPEP00000009223.1, ENSNPET00000009452.1
    Conserved Domains (3) summary
    cd05171
    Location:2695 → 2974
    PIKKc_ATM; Catalytic domain of Ataxia Telangiectasia Mutated
    pfam11640
    Location:8 → 164
    TAN; Telomere-length maintenance and DNA damage repair
    cl26692
    Location:2137 → 3066
    FRB_dom; FKBP12-rapamycin binding domain

  2. XM_026035008.1 → XP_025890793.1  serine-protein kinase ATM isoform X1

    UniProtKB/TrEMBL
    A0A8C6Z7X0
    Conserved Domains (3) summary
    cd05171
    Location:2695 → 2974
    PIKKc_ATM; Catalytic domain of Ataxia Telangiectasia Mutated
    pfam11640
    Location:8 → 164
    TAN; Telomere-length maintenance and DNA damage repair
    cl26692
    Location:2137 → 3067
    FRB_dom; FKBP12-rapamycin binding domain

  3. XM_026035010.1 → XP_025890795.1  serine-protein kinase ATM isoform X3

    Conserved Domains (1) summary
    pfam11640
    Location:8 → 164
    TAN; Telomere-length maintenance and DNA damage repair
Nucleotide Protein
Heading Accession and Version

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