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NLGN1 neuroligin 1 [ Vulpes vulpes (red fox) ]

Gene ID: 112926680, updated on 15-Mar-2024

Summary

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Gene symbol
NLGN1
Gene description
neuroligin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356501.1 (7734566..8553683)

NW_020356501.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like Neighboring gene spermatogenesis associated 16 Neighboring gene epithelial cell transforming 2 Neighboring gene uncharacterized LOC112926685 Neighboring gene N-acetylated alpha-linked acidic dipeptidase like 2 Neighboring gene PDZ domain-containing protein 11 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356501 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neurexin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postsynaptic membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in presynaptic membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic specialization membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuroligin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356501.1 Reference VulVul2.2 Primary Assembly

    Range
    7734566..8553683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026007767.1 → XP_025863552.1  neuroligin-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7TD85
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 626
    COesterase; Carboxylesterase family

  2. XM_026007766.1 → XP_025863551.1  neuroligin-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7TD85
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 626
    COesterase; Carboxylesterase family

  3. XM_026007768.1 → XP_025863553.1  neuroligin-1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q7T2F7
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 606
    COesterase; Carboxylesterase family

  4. XM_026007769.1 → XP_025863554.1  neuroligin-1 isoform X3

    UniProtKB/TrEMBL
    A0A3Q7SMY9
    Conserved Domains (1) summary
    pfam00135
    Location:51 → 597
    COesterase; Carboxylesterase family
Nucleotide Protein Strain
Heading Accession and Version

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