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NOP56 NOP56 ribonucleoprotein [ Puma concolor (puma) ]

Gene ID: 112869138, updated on 11-Apr-2024

Summary

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Gene symbol
NOP56
Gene description
NOP56 ribonucleoprotein
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020340008.1 (29081905..29087105)

NW_020340008.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein polypeptides B and B1 Neighboring gene transmembrane channel like 2 Neighboring gene small nucleolar RNA SNORD110 Neighboring gene small nucleolar RNA SNORA51 Neighboring gene small nucleolar RNA SNORD86 Neighboring gene small nucleolar RNA SNORD56 Neighboring gene small nucleolar RNA SNORD57 Neighboring gene isoleucine--tRNA ligase, cytoplasmic-like Neighboring gene isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020340008 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of box C/D methylation guide snoRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleolar protein 56

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020340008.1 Reference PumCon1.0 Primary Assembly

    Range
    29081905..29087105
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025932207.1 → XP_025787992.1  nucleolar protein 56

    UniProtKB/TrEMBL
    A0A6P6IIN1
    Conserved Domains (2) summary
    COG1498
    Location:48 → 412
    SIK1; RNA processing factor Prp31, contains Nop domain [Translation, ribosomal structure and biogenesis]
    pfam08156
    Location:5 → 70
    NOP5NT; NOP5NT (NUC127) domain
Nucleotide Protein
Heading Accession and Version

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