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TAPT1 transmembrane anterior posterior transformation 1 [ Puma concolor (puma) ]

Gene ID: 112858653, updated on 15-Mar-2024

Summary

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Gene symbol
TAPT1
Gene description
transmembrane anterior posterior transformation 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339223.1 (12395561..12464341, complement)

NW_020339223.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene U2 spliceosomal RNA Neighboring gene prominin 1 Neighboring gene LIM domain binding 2 Neighboring gene quinoid dihydropteridine reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020339223 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in maintenance of protein localization in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane anterior posterior transformation protein 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020339223.1 Reference PumCon1.0 Primary Assembly

    Range
    12395561..12464341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025922102.1 → XP_025777887.1  transmembrane anterior posterior transformation protein 1 homolog

    UniProtKB/TrEMBL
    A0A6P6HQ44
    Conserved Domains (1) summary
    pfam05346
    Location:178 → 482
    DUF747; Eukaryotic membrane protein family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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