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JPH4 junctophilin 4 [ Puma concolor (puma) ]

Gene ID: 112855703, updated on 15-Mar-2024

Summary

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Gene symbol
JPH4
Gene description
junctophilin 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See JPH4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339215.1 (78437160..78451403, complement)

NW_020339215.1Genomic Context describing neighboring genes Neighboring gene thiamine triphosphatase Neighboring gene adaptor related protein complex 1 subunit gamma 2 Neighboring gene dehydrogenase/reductase SDR family member 2, mitochondrial-like Neighboring gene dehydrogenase/reductase SDR family member 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020339215 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of synaptic plasticity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of junctional membrane complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
junctophilin-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020339215.1 Reference PumCon1.0 Primary Assembly

    Range
    78437160..78451403 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025919289.1 → XP_025775074.1  junctophilin-4

    UniProtKB/TrEMBL
    A0A6P6HH33
    Conserved Domains (3) summary
    smart00698
    Location:25 → 41
    MORN; Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases
    cl26386
    Location:267 → 504
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    cl27415
    Location:179 → 242
    COG4642; Uncharacterized conserved protein [Function unknown]
Nucleotide Protein
Heading Accession and Version

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