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MMP9 matrix metallopeptidase 9 [ Canis lupus dingo (dingo) ]

Gene ID: 112674054, updated on 15-Mar-2024

Summary

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Gene symbol
MMP9
Gene description
matrix metallopeptidase 9
See related
Ensembl:ENSCAFG00020014189
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 24
Exon count:
13
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 24 NC_064266.1 (33340521..33347609)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 24 Unlocalized Scaffold NW_023365209.1 (33589704..33596792)

Chromosome 24 - NC_064266.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 335 Neighboring gene uncharacterized LOC118352280 Neighboring gene solute carrier family 12 member 5 Neighboring gene nuclear receptor coactivator 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
matrix metalloproteinase-9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064266.1 Reference ASM325472v2

    Range
    33340521..33347609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025470267.2 → XP_025326052.1  matrix metalloproteinase-9

    UniProtKB/Swiss-Prot
    O18733, O19130
    UniProtKB/TrEMBL
    A0A8C0KK96, A0A8C0Q774, A0A8I3P478
    Related
    ENSCAFP00020017775.1
    Conserved Domains (3) summary
    smart00059
    Location:340 → 388
    FN2; Fibronectin type 2 domain
    cd00094
    Location:511 → 701
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    pfam00413
    Location:115 → 444
    Peptidase_M10; Matrixin
Nucleotide Protein
Heading Accession and Version

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