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RRH retinal pigment epithelium-derived rhodopsin homolog [ Canis lupus dingo (dingo) ]

Gene ID: 112671645, updated on 6-Jun-2024

Summary

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Gene symbol
RRH
Gene description
retinal pigment epithelium-derived rhodopsin homolog
See related
Ensembl:ENSCAFG00020015567
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 32
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 32 NC_064274.1 (30042357..30059819)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 32 Unlocalized Scaffold NW_023365232.1 (30180590..30199319)

Chromosome 32 - NC_064274.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene complement factor I Neighboring gene GAR1 ribonucleoprotein Neighboring gene uncharacterized LOC118353135 Neighboring gene leucine rich repeat, Ig-like and transmembrane domains 3 Neighboring gene 40S ribosomal protein S27-like Neighboring gene U2 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in visual perception IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in photoreceptor outer segment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
visual pigment-like receptor peropsin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064274.1 Reference ASM325472v2

    Range
    30042357..30059819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025465914.3 → XP_025321699.1  visual pigment-like receptor peropsin

    UniProtKB/TrEMBL
    A0A8C0KSS9, A0A8C0Z5Y4, A0A8I3Q2A7, A0A8P0NDG8
    Related
    ENSCAFP00020019585.1
    Conserved Domains (1) summary
    cd15073
    Location:36 → 315
    7tmA_Peropsin; retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_049104950.1 → XP_048960907.1  visual pigment-like receptor peropsin

    UniProtKB/TrEMBL
    A0A8C0KSS9, A0A8C0Z5Y4, A0A8I3Q2A7, A0A8P0NDG8

RNA

  1. XR_004811438.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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