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KDM1B lysine demethylase 1B [ Canis lupus dingo (dingo) ]

Gene ID: 112657665, updated on 15-Mar-2024

Summary

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Gene symbol
KDM1B
Gene description
lysine demethylase 1B
See related
Ensembl:ENSCAFG00020010341
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 35
Exon count:
22
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 35 NC_064277.1 (17051709..17111804)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 35 Unlocalized Scaffold NW_023365250.1 (17188251..17248307)

Chromosome 35 - NC_064277.1Genomic Context describing neighboring genes Neighboring gene NHL repeat containing E3 ubiquitin protein ligase 1 Neighboring gene thiopurine S-methyltransferase Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORA1 Neighboring gene DEK proto-oncogene Neighboring gene ring finger protein 144B Neighboring gene uncharacterized LOC118353373

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysine-specific histone demethylase 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064277.1 Reference ASM325472v2

    Range
    17051709..17111804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025443722.3 → XP_025299507.1  lysine-specific histone demethylase 1B

    UniProtKB/TrEMBL
    A0A8C0NBZ0
    Related
    ENSCAFP00020013036.1
    Conserved Domains (2) summary
    PLN02328
    Location:300 → 817
    PLN02328; lysine-specific histone demethylase 1 homolog
    pfam07496
    Location:138 → 191
    zf-CW; CW-type Zinc Finger

  2. XM_025443730.3 → XP_025299515.1  lysine-specific histone demethylase 1B

    UniProtKB/TrEMBL
    A0A8C0NBZ0
    Conserved Domains (2) summary
    PLN02328
    Location:300 → 817
    PLN02328; lysine-specific histone demethylase 1 homolog
    pfam07496
    Location:138 → 191
    zf-CW; CW-type Zinc Finger
Nucleotide Protein
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