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SLC44A1 solute carrier family 44 member 1 [ Canis lupus dingo (dingo) ]

Gene ID: 112650502, updated on 6-Jun-2024

Summary

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Gene symbol
SLC44A1
Gene description
solute carrier family 44 member 1
See related
Ensembl:ENSCAFG00020020087
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
18
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 11 NC_064253.1 (60639757..60833313)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 11 Unlocalized Scaffold NW_023365147.1 (62379606..62572511)

Chromosome 11 - NC_064253.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC112649962 Neighboring gene uncharacterized LOC118350322 Neighboring gene U4 spliceosomal RNA Neighboring gene fibronectin type III and SPRY domain containing 1 like Neighboring gene basic proline-rich protein-like Neighboring gene fukutin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in choline transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline transporter-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064253.1 Reference ASM325472v2

    Range
    60639757..60833313
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025433237.3 → XP_025289022.1  choline transporter-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0L715
    Conserved Domains (1) summary
    pfam04515
    Location:294 → 604
    Choline_transpo; Plasma-membrane choline transporter

  2. XM_049116336.1 → XP_048972293.1  choline transporter-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0L3D8

  3. XM_049116338.1 → XP_048972295.1  choline transporter-like protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0QPF0

  4. XM_049116337.1 → XP_048972294.1  choline transporter-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0QLU7, A0A8I3RYA4

  5. XM_049116339.1 → XP_048972296.1  choline transporter-like protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0QLU7
Nucleotide Protein
Heading Accession and Version

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