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LTBP1 latent transforming growth factor beta binding protein 1 [ Theropithecus gelada (gelada) ]

Gene ID: 112604778, updated on 15-Mar-2024

Summary

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Gene symbol
LTBP1
Gene description
latent transforming growth factor beta binding protein 1
See related
Ensembl:ENSTGEG00000026321
Gene type
protein coding
RefSeq status
MODEL
Organism
Theropithecus gelada
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Theropithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
35
Annotation release Status Assembly Chr Location
100 current Tgel_1.0 (GCF_003255815.1) 13 NC_037681.1 (53322882..53771377)

Chromosome 13 - NC_037681.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 27 Neighboring gene uncharacterized LOC112605005 Neighboring gene uncharacterized LOC112605361 Neighboring gene RAS guanyl releasing protein 3 Neighboring gene family with sequence similarity 98 member A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037681.1 Chromosome 13 Reference Tgel_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
latent-transforming growth factor beta-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Theropithecus gelada Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tgel_1.0 Primary Assembly

Genomic

  1. NC_037681.1 Reference Tgel_1.0 Primary Assembly

    Range
    53322882..53771377
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025354196.1 → XP_025209981.1  latent-transforming growth factor beta-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8D2GCJ9
    Related
    ENSTGEP00000032977.1, ENSTGET00000039155.1
    Conserved Domains (6) summary
    smart00179
    Location:1203 → 1244
    EGF_CA; Calcium-binding EGF-like domain
    cd00054
    Location:999 → 1032
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00683
    Location:690 → 729
    TB; TB domain
    pfam07645
    Location:916 → 956
    EGF_CA; Calcium-binding EGF domain
    pfam12662
    Location:897 → 919
    cEGF; Complement Clr-like EGF-like
    cl26464
    Location:743 → 869
    Atrophin-1; Atrophin-1 family

  2. XM_025354197.1 → XP_025209982.1  latent-transforming growth factor beta-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8D2G4W8
    Conserved Domains (6) summary
    smart00179
    Location:876 → 917
    EGF_CA; Calcium-binding EGF-like domain
    cd00054
    Location:672 → 705
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00683
    Location:363 → 402
    TB; TB domain
    pfam07645
    Location:589 → 629
    EGF_CA; Calcium-binding EGF domain
    pfam12662
    Location:570 → 592
    cEGF; Complement Clr-like EGF-like
    cl26464
    Location:416 → 542
    Atrophin-1; Atrophin-1 family

  3. XM_025354198.1 → XP_025209983.1  latent-transforming growth factor beta-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8D2G4W8
    Conserved Domains (5) summary
    smart00179
    Location:823 → 864
    EGF_CA; Calcium-binding EGF-like domain
    cd00054
    Location:619 → 652
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00683
    Location:363 → 397
    TB; TB domain
    pfam07645
    Location:536 → 576
    EGF_CA; Calcium-binding EGF domain
    pfam12662
    Location:517 → 539
    cEGF; Complement Clr-like EGF-like

  4. XM_025354199.1 → XP_025209984.1  latent-transforming growth factor beta-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8D2G4W8
    Related
    ENSTGEP00000032980.1, ENSTGET00000039158.1
    Conserved Domains (5) summary
    smart00179
    Location:823 → 864
    EGF_CA; Calcium-binding EGF-like domain
    cd00054
    Location:619 → 652
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00683
    Location:363 → 397
    TB; TB domain
    pfam07645
    Location:536 → 576
    EGF_CA; Calcium-binding EGF domain
    pfam12662
    Location:517 → 539
    cEGF; Complement Clr-like EGF-like
Nucleotide Protein
Heading Accession and Version

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