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ERLIN2 ER lipid raft associated 2 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112413177, updated on 15-Mar-2024

Summary

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Gene symbol
ERLIN2
Gene description
ER lipid raft associated 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020175192.1 (5645147..5661862, complement)

NW_020175192.1Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor A2 Neighboring gene BRF2 RNA polymerase III transcription initiation factor subunit Neighboring gene pyridoxal phosphate binding protein Neighboring gene zinc finger protein 703 Neighboring gene eukaryotic translation initiation factor 2 subunit 3, X-linked pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020175192 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SREBP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
erlin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020175192.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    5645147..5661862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024765067.1 → XP_024620835.1  erlin-2 isoform X1

    UniProtKB/TrEMBL
    A0A341D2D0
    Conserved Domains (1) summary
    cd03406
    Location:16 → 308
    SPFH_like_u3; Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

  2. XM_024765068.1 → XP_024620836.1  erlin-2 isoform X2

    UniProtKB/TrEMBL
    A0A341D1E8
    Conserved Domains (1) summary
    cl19107
    Location:1 → 226
    SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

RNA

  1. XR_003005916.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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