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NR6A1 nuclear receptor subfamily 6 group A member 1 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112411560, updated on 15-Mar-2024

Summary

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Gene symbol
NR6A1
Gene description
nuclear receptor subfamily 6 group A member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020175018.1 (9846042..10020314, complement)

NW_020175018.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112411468 Neighboring gene nuclear receptor subfamily 5 group A member 1 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene uncharacterized LOC112411562 Neighboring gene 60S ribosomal protein L6 pseudogene Neighboring gene olfactomedin like 2A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020175018 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor subfamily 6 group A member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020175018.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    9846042..10020314 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024762789.1 → XP_024618557.1  nuclear receptor subfamily 6 group A member 1 isoform X2

    UniProtKB/TrEMBL
    A0A341CXG1
    Conserved Domains (2) summary
    cd06953
    Location:152 → 363
    NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
    cl02596
    Location:1 → 38
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

  2. XM_024762788.1 → XP_024618556.1  nuclear receptor subfamily 6 group A member 1 isoform X1

    UniProtKB/TrEMBL
    A0A341CV04
    Conserved Domains (2) summary
    cd06953
    Location:153 → 364
    NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
    cl02596
    Location:1 → 38
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
Nucleotide Protein
Heading Accession and Version

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