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AFTPH aftiphilin [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112404846, updated on 15-Mar-2024

Summary

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Gene symbol
AFTPH
Gene description
aftiphilin
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020173955.1 (618244..682653, complement)

NW_020173955.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112404863 Neighboring gene SERTA domain containing 2 Neighboring gene uncharacterized proline-rich protein-like Neighboring gene probable RNA-binding protein 46 Neighboring gene galectin like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020173955 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-1 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aftiphilin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020173955.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    618244..682653 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024752952.1 → XP_024608720.1  aftiphilin isoform X1

    UniProtKB/TrEMBL
    A0A341C2J7
    Conserved Domains (1) summary
    pfam15045
    Location:699 → 767
    Clathrin_bdg; Clathrin-binding box of Aftiphilin, vesicle trafficking

  2. XM_024752951.1 → XP_024608719.1  aftiphilin isoform X1

    UniProtKB/TrEMBL
    A0A341C2J7
    Conserved Domains (1) summary
    pfam15045
    Location:699 → 767
    Clathrin_bdg; Clathrin-binding box of Aftiphilin, vesicle trafficking

  3. XM_024752953.1 → XP_024608721.1  aftiphilin isoform X2

    UniProtKB/TrEMBL
    A0A341C1L9
    Conserved Domains (1) summary
    pfam15045
    Location:699 → 767
    Clathrin_bdg; Clathrin-binding box of Aftiphilin, vesicle trafficking
Nucleotide Protein
Heading Accession and Version

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