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WDR35 WD repeat domain 35 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112401520, updated on 15-Mar-2024

Summary

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Gene symbol
WDR35
Gene description
WD repeat domain 35
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020173656.1 (2196751..2257800, complement)

NW_020173656.1Genomic Context describing neighboring genes Neighboring gene odd-skipped related transcription factor 1 Neighboring gene tetratricopeptide repeat domain 32 Neighboring gene E3 ubiquitin-protein ligase RNFT1 pseudogene Neighboring gene matrilin 3 Neighboring gene lysosomal protein transmembrane 4 alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020173656 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intraciliary retrograde transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of intraciliary transport particle A IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in non-motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 35

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020173656.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    2196751..2257800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024747821.1 → XP_024603589.1  WD repeat-containing protein 35 isoform X3

    UniProtKB/TrEMBL
    A0A341BMZ3
    Conserved Domains (5) summary
    COG2319
    Location:7 → 217
    WD40; WD40 repeat [General function prediction only]
    cd15832
    Location:740 → 794
    SNAP; TPR repeat [structural motif]
    sd00039
    Location:18 → 69
    7WD40; WD40 repeat [structural motif]
    pfam04053
    Location:630 → 693
    Coatomer_WDAD; Coatomer WD associated region
    cl24038
    Location:733 → 908
    SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family

  2. XM_024747820.1 → XP_024603588.1  WD repeat-containing protein 35 isoform X2

    UniProtKB/TrEMBL
    A0A341BP70
    Conserved Domains (5) summary
    COG2319
    Location:7 → 217
    WD40; WD40 repeat [General function prediction only]
    cd15832
    Location:764 → 818
    SNAP; TPR repeat [structural motif]
    sd00039
    Location:18 → 69
    7WD40; WD40 repeat [structural motif]
    pfam04053
    Location:654 → 717
    Coatomer_WDAD; Coatomer WD associated region
    cl24038
    Location:757 → 932
    SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family

  3. XM_024747819.1 → XP_024603587.1  WD repeat-containing protein 35 isoform X1

    UniProtKB/TrEMBL
    A0A341BPB4
    Conserved Domains (5) summary
    COG2319
    Location:7 → 217
    WD40; WD40 repeat [General function prediction only]
    cd15832
    Location:782 → 836
    SNAP; TPR repeat [structural motif]
    sd00039
    Location:18 → 69
    7WD40; WD40 repeat [structural motif]
    pfam04053
    Location:672 → 735
    Coatomer_WDAD; Coatomer WD associated region
    cl24038
    Location:775 → 950
    SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family
Nucleotide Protein
Heading Accession and Version

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