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RUNX1 RUNX family transcription factor 1 [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112305670, updated on 6-Jun-2024

Summary

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Gene symbol
RUNX1
Gene description
RUNX family transcription factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) 2 NC_071388.1 (3285498..3495703, complement)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020090470.1 (3457554..3673974, complement)

Chromosome 2 - NC_071388.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123479741 Neighboring gene uncharacterized LOC123479742 Neighboring gene chloride intracellular channel 6 Neighboring gene uncharacterized LOC112305686 Neighboring gene E3 ubiquitin-protein ligase RNF113A-like Neighboring gene SET domain containing 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hemopoiesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
runt-related transcription factor 1
Names
Putative runt
runt related transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071388.1 Reference HLdesRot8A Primary Assembly

    Range
    3285498..3495703 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053916882.1 → XP_053772857.1  runt-related transcription factor 1 isoform X2

    UniProtKB/TrEMBL
    K9J4A2

  2. XM_053916885.1 → XP_053772860.1  runt-related transcription factor 1 isoform X3

    UniProtKB/TrEMBL
    K9J4A2

  3. XM_053916875.1 → XP_053772850.1  runt-related transcription factor 1 isoform X1

    UniProtKB/TrEMBL
    K9J4A2
Nucleotide Protein
Heading Accession and Version

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