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fbxo30a F-box protein 30a [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112261500, updated on 18-Jun-2024

Summary

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Gene symbol
fbxo30a
Gene description
F-box protein 30a
See related
Ensembl:ENSOTSG00005020590
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
fbxo30
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Genomic context

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Location:
chromosome: LG11
Exon count:
3
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG11 NC_056439.1 (16736244..16744148, complement)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 11 NC_037107.1 (15943997..15949241, complement)

Linkage Group LG11 - NC_056439.1Genomic Context describing neighboring genes Neighboring gene forkhead box protein O3 Neighboring gene uncharacterized si:ch73-242m19.1 Neighboring gene uncharacterized LOC112261512 Neighboring gene alpha-tectorin Neighboring gene SNF2 histone linker PHD RING helicase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box only protein 30
Names
F-box protein 30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056439.1 Reference Otsh_v2.0 Primary Assembly

    Range
    16736244..16744148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024436881.2 → XP_024292649.1  F-box only protein 30

    UniProtKB/TrEMBL
    A0A8C8G3L0
    Conserved Domains (2) summary
    pfam15965
    Location:5 → 97
    zf-TRAF_2; TRAF-like zinc-finger
    pfam15966
    Location:654 → 762
    F-box_4

  2. XM_024436880.2 → XP_024292648.1  F-box only protein 30

    UniProtKB/TrEMBL
    A0A8C8G3L0
    Related
    ENSOTSP00005042770.1, ENSOTST00005046536.2
    Conserved Domains (2) summary
    pfam15965
    Location:5 → 97
    zf-TRAF_2; TRAF-like zinc-finger
    pfam15966
    Location:654 → 762
    F-box_4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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