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calm1a calmodulin 1a [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112256797, updated on 18-Jun-2024

Summary

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Gene symbol
calm1a
Gene description
calmodulin 1a
See related
Ensembl:ENSOTSG00005059687
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
calm1
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Genomic context

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Location:
chromosome: LG08
Exon count:
6
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG08 NC_056436.1 (21348462..21363914, complement)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 8 NC_037104.1 (59059020..59074536)

Linkage Group LG08 - NC_056436.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein 7B Neighboring gene BRMS1 like transcriptional repressor a Neighboring gene NRDE-2, necessary for RNA interference, domain containing Neighboring gene 26S proteasome regulatory subunit 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calmodulin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056436.1 Reference Otsh_v2.0 Primary Assembly

    Range
    21348462..21363914 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024430307.2 → XP_024286075.1  calmodulin-1

    UniProtKB/TrEMBL
    A0A8C8FXK8, A0A8C8HC88
    Related
    ENSOTSP00005143758.1, ENSOTST00005124984.1
    Conserved Domains (1) summary
    PTZ00184
    Location:1 → 149
    PTZ00184; calmodulin; Provisional
Nucleotide Protein
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Gene LinkOut

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