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soat1 sterol O-acyltransferase 1 [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112251021, updated on 18-Jun-2024

Summary

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Gene symbol
soat1
Gene description
sterol O-acyltransferase 1
See related
Ensembl:ENSOTSG00005005604
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG05
Exon count:
18
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG05 NC_056433.1 (60001308..60010947, complement)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 5 NC_037101.1 (64273903..64283557, complement)

Linkage Group LG05 - NC_056433.1Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein-like 9 Neighboring gene tyrosine-protein kinase ABL2 Neighboring gene collagen alpha-2(V) chain Neighboring gene uncharacterized LOC112251817

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol efflux IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol O-acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056433.1 Reference Otsh_v2.0 Primary Assembly

    Range
    60001308..60010947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024421637.2 → XP_024277405.1  sterol O-acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C8CMV7
    Related
    ENSOTSP00005010497.2, ENSOTST00005011585.2
    Conserved Domains (1) summary
    cl00738
    Location:251 → 483
    MBOAT; membrane-bound O-acyltransferase family

  2. XM_024421638.2 → XP_024277406.1  sterol O-acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C8CKX2
    Related
    ENSOTSP00005010493.2, ENSOTST00005011581.2
    Conserved Domains (1) summary
    cl00738
    Location:289 → 521
    MBOAT; membrane-bound O-acyltransferase family

  3. XM_024421639.2 → XP_024277407.1  sterol O-acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C8CMV7
    Conserved Domains (1) summary
    cl00738
    Location:251 → 483
    MBOAT; membrane-bound O-acyltransferase family

  4. XM_024421640.2 → XP_024277408.1  sterol O-acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C8CMV7
    Related
    ENSOTSP00005010496.2, ENSOTST00005011584.2
    Conserved Domains (1) summary
    cl00738
    Location:251 → 483
    MBOAT; membrane-bound O-acyltransferase family
Nucleotide Protein
Heading Accession and Version

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