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ttll2 tubulin tyrosine ligase-like family, member 2 [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112218079, updated on 15-Mar-2024

Summary

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Gene symbol
ttll2
Gene description
tubulin tyrosine ligase-like family, member 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG18
Exon count:
2
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG18 NC_056446.1 (16845850..16849519)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 18 NC_037114.1 (16531647..16534413, complement)

Linkage Group LG18 - NC_056446.1Genomic Context describing neighboring genes Neighboring gene protein unc-93 homolog A-like Neighboring gene protein unc-93 homolog A-like Neighboring gene centromere protein J Neighboring gene G protein-coupled receptor 31

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tubulin-glutamic acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable tubulin polyglutamylase TTLL2
Names
tubulin tyrosine ligase like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056446.1 Reference Otsh_v2.0 Primary Assembly

    Range
    16845850..16849519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024378674.2 → XP_024234442.1  probable tubulin polyglutamylase TTLL2

    UniProtKB/TrEMBL
    A0A8C8JJW7
    Conserved Domains (1) summary
    pfam03133
    Location:65 → 337
    TTL; Tubulin-tyrosine ligase family
Nucleotide Protein
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