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trnat-agu transfer RNA threonine (anticodon AGU) [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112216672, updated on 12-Jul-2021

Summary

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Gene symbol
trnat-agu
Gene description
transfer RNA threonine (anticodon AGU)
Gene type
tRNA
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
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Genomic context

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Location:
chromosome: LG16
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG16 NC_056444.1 (20456046..20456119, complement)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 16 NC_037112.1 (12342072..12342145)

Linkage Group LG16 - NC_056444.1Genomic Context describing neighboring genes Neighboring gene zinc finger, C2HC-type containing 1A Neighboring gene cAMP-dependent protein kinase inhibitor alpha Neighboring gene E3 ubiquitin-protein ligase MARCHF6 Neighboring gene arylamine N-acetyltransferase 2-like Neighboring gene palmitoyltransferase ZDHHC20-B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056444.1 Reference Otsh_v2.0 Primary Assembly

    Range
    20456046..20456119 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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