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LOC112163305 dual specificity protein phosphatase 26 [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112163305, updated on 12-Sep-2024

Summary

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Gene symbol
LOC112163305
Gene description
dual specificity protein phosphatase 26
See related
EnsemblRapid:ENSOMEG00005013090
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Also known as
dusp26
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: LG12
Exon count:
7
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG12 NC_050523.1 (2184314..2207424)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096103.1 (2184037..2240051)

Linkage Group LG12 - NC_050523.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112162849 Neighboring gene DEAD (Asp-Glu-Ala-Asp) box helicase 56 Neighboring gene peptidyl-prolyl cis-trans isomerase Neighboring gene zinc finger, MIZ-type containing 2 Neighboring gene uncharacterized LOC118599413 Neighboring gene CAP-GLY domain containing linker protein 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MAP kinase phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dual specificity protein phosphatase 26
Names
dual specificity phosphatase 26

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050523.1 Reference ASM292280v2 Primary Assembly

    Range
    2184314..2207424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024299638.2 → XP_024155406.1  dual specificity protein phosphatase 26

    UniProtKB/TrEMBL
    A0A3B3CRH0
    Conserved Domains (1) summary
    cd14578
    Location:47 → 189
    DUSP26; dual specificity protein phosphatase 26

  2. XM_036214384.1 → XP_036070277.1  dual specificity protein phosphatase 26

    UniProtKB/TrEMBL
    A0A3B3CRH0
    Conserved Domains (1) summary
    cd14578
    Location:47 → 189
    DUSP26; dual specificity protein phosphatase 26

  3. XM_024299637.2 → XP_024155405.1  dual specificity protein phosphatase 26

    UniProtKB/TrEMBL
    A0A3B3CRH0
    Conserved Domains (1) summary
    cd14578
    Location:47 → 189
    DUSP26; dual specificity protein phosphatase 26

  4. XM_024299636.2 → XP_024155404.1  dual specificity protein phosphatase 26

    UniProtKB/TrEMBL
    A0A3B3CRH0
    Related
    ENSOMEP00005030299.1, ENSOMET00005033010.1
    Conserved Domains (1) summary
    cd14578
    Location:47 → 189
    DUSP26; dual specificity protein phosphatase 26

RNA

  1. XR_002922263.2 RNA Sequence

  2. XR_004948746.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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